Adrian Mark Tompkins f5a8b997ea9 removed stochastic term from vector cycle for moment to test reproducibility, introduces slight temp mode, will remove soon in next release, minor bug correct on dates in point_input utils and date-corrected fake data file 28 Mar 2019 tompkins 022a1f14859 complete separation of all netcdf calls to cdf_tools module, further refinement of the call scripts, addition of second file for grib precip, interface routines now in single mo_interface module which will then call either grib or netcdf routines - restarts working but not reproducible 28 Mar 2019 tompkins b4e948a8fdc replaced getopt with standard bash getopts, first tidy up with restarts 26 Mar 2019 Adrian Mark Tompkins 66759603cd6 documentation 26 Mar 2019 Adrian Mark Tompkins 71fcbcf2265 cleaned up data files and utils - still need to update the instructions doc files 25 Mar 2019 Adrian Mark Tompkins a90092f47c7 script moved up to vectri home and now called vectri 11 Feb 2019 Adrian Mark Tompkins 53aac49ce04 minor edits to fix merge glitches 11 Feb 2019 Adrian Mark Tompkins 751a49e8233 setup correct 11 Feb 2019 Adrian Mark Tompkins 4ec4fbe9f76 M huge clean up to interface, which now just needs one climate and one datafile, v1.5 tagged in ECMWF branch 11 Feb 2019 Francesca Di Giuseppe cf55c9f9173 clean up and minor bug correct on netcdf var name 06 Feb 2019 Francesca Di Giuseppe 8ea8c5ffccd v1.5 massive code clean up, simplified interface 06 Feb 2019 Francesca Di Giuseppe d9b36b7b8ec first 05 Feb 2019 Francesca Di Giuseppe e579e8fb661 recoding to read output/run dimensions from a single netcdf file, removing all ascii i/o 05 Feb 2019 Francesca Di Giuseppe cd0c1e3436b makefile for ecmwf 05 Feb 2019 Francesca Di Giuseppe 681ea308904 first ecmwf version 05 Feb 2019 Adrian Mark Tompkins 1a584de412a updates to driver files 19 Jun 2018 Adrian Mark Tompkins 29db4f7b5c5 edits for scripts cleaning 19 Sep 2017 Adrian Mark Tompkins 3bc73a41894 minor edit to driver 22 May 2017 Adrian Mark Tompkins 173dc2c79e2 minor changes to remapping, more generalized access to ERAI for flexible filename structure 13 May 2017 Adrian Mark Tompkins 6b564f51572 1) minor bug correct on missing population values, 2)tidy up unused warnings 3) preprocess compatible with cdo 1.8.1 11 May 2017 Adrian Mark Tompkins 56fabbee485 # missing preprocess 11 May 2017 Adrian Mark Tompkins b3a2e46dc87 updated manual for 1.4.6 11 May 2017 Adrian Mark Tompkins d2f0221e278 M Merge branch 'master' of https://gitlab.com/tompkins/vectri 11 May 2017 Adrian Mark Tompkins d91f5440a2c updated manual for v1.4.6 11 May 2017 Adrian Mark Tompkins 6dcbec0ec99 added information to driver 10 May 2017 Adrian Mark Tompkins 2fe70f319fe timer change 09 May 2017 Adrian Mark Tompkins ddf564dc8ca Minor edits to scripts. Code now works again for single point netcdf runs (mode 3)
Code now works again for Zero time mode 5
Updated manuals 08 May 2017 Adrian Mark Tompkins d467be74c2c M Merge branch 'master' of gitlab.com:tompkins/vectri 08 Aug 2016 Adrian Mark Tompkins d6ceba1b854 minor bug correct on l2d and spinup length exceeding nday is reset to nday rather than zero 08 Aug 2016 Adrian Mark Tompkins 2b28d7d609d minor changes to module convert integer params to floats for safety 01 Jun 2016 Adrian Mark Tompkins 1006017058d Add open source licence agreement 31 May 2016 Adrian Mark Tompkins 5f31c58f392 bug correction with spinup length and minor output edits 19 May 2016 Adrian Mark Tompkins d52c62751f8 delete a debug print statement 10 May 2016 Adrian Mark Tompkins f730e4b416a M merge branch immunity, and tag v1.4 09 May 2016 Adrian Mark Tompkins 0f2da93b713 bug correction on death rates, changes to default parameters 09 May 2016 Adrian Mark Tompkins 1fff365aa9e added full run command to the netcdf output 14 Apr 2016 Adrian Mark Tompkins 5f01645728f 1. New larvae mortality function fitting the data of Craig using a Logistic function. 2. Stochastic term replaces the bin 0 spread function in order to
remove a numerical issue when ngono<100. Behaviour now robust
3. Slight tidying up of the new immunity scheme and cases diagnostics.
4. New nose-testing python code for runs at constant temperature and
rainfall 14 Apr 2016 Adrian Mark Tompkins 5853ac26879 indentation on vectri.f90 13 Apr 2016 Adrian Mark Tompkins c492d5404be upgrades to immunity - issues to resolve 13 Apr 2016 Adrian Mark Tompkins 4a603a20a2b bug correct to spin up 08 Apr 2016 Adrian Mark Tompkins f168b1dd823 minor bug in spinup corrected 08 Apr 2016 Adrian Mark Tompkins 71e3b7ba436 correction to defaults and water temperature 07 Apr 2016 Adrian Mark Tompkins d0c241004ba correction on host to vector transmission to account for higher bite risk 07 Apr 2016 Adrian Mark Tompkins 06f2108f762 minor correction to vectri 06 Apr 2016 Adrian Mark Tompkins 5c5aa3971b5 updated makefile to have different linux/MAC OX options 06 Apr 2016 Adrian Mark Tompkins 8b52dcc8bff cleaning and minor bugs in immunity branch 06 Apr 2016 Adrian Mark Tompkins 50728dbfa89 minor edit 05 Apr 2016 Adrian Mark Tompkins 6a13c10a8aa death/birth rate added 05 Apr 2016 Adrian Mark Tompkins 6abf73fd7fd Added immunity to model and cases diagnostic 05 Apr 2016 Adrian Mark Tompkins e4311222501 Bayoh vector mortality relationship and default value of mortality corrected 04 Apr 2016 
Adrian Mark Tompkins
tompkins
tompkins
Francesca Di Giuseppe